{"entity": "researcher", "timestamp": "2026-08-20T21:16:34.540Z", "family": "Pohlit", "given": "Hannah", "initials": "H", "orcid": "0000-0002-6366-7836", "affiliations": [], "links": {"self": {"href": "https://publications-affiliated.scilifelab.se/researcher/51f92fd9b801400d97400b78a937db6c.json"}, "display": {"href": "https://publications-affiliated.scilifelab.se/researcher/51f92fd9b801400d97400b78a937db6c"}}, "publications": [{"entity": "publication", "iuid": "7e4434caa19c49c0be320d4f43e61fa3", "links": {"self": {"href": "https://publications-affiliated.scilifelab.se/publication/7e4434caa19c49c0be320d4f43e61fa3.json"}, "display": {"href": "https://publications-affiliated.scilifelab.se/publication/7e4434caa19c49c0be320d4f43e61fa3"}}, "title": "Confocal imaging dataset to assess endothelial cell orientation during extreme glucose conditions.", "authors": [{"family": "Porras Hern\u00e1ndez", "given": "Ana Mar\u00eda", "initials": "AM", "orcid": "0000-0001-5952-2418", "researcher": {"href": "https://publications-affiliated.scilifelab.se/researcher/b3c7742b33f8499baad542f0a2738a27.json"}}, {"family": "Barbe", "given": "Laurent", "initials": "L"}, {"family": "Pohlit", "given": "Hannah", "initials": "H", "orcid": "0000-0002-6366-7836", "researcher": {"href": "https://publications-affiliated.scilifelab.se/researcher/51f92fd9b801400d97400b78a937db6c.json"}}, {"family": "Tenje", "given": "Maria", "initials": "M", "orcid": "0000-0002-1264-1337", "researcher": {"href": "https://publications-affiliated.scilifelab.se/researcher/bd13273274574923b354ca9c605efc8f.json"}}, {"family": "Antfolk", "given": "Maria", "initials": "M", "orcid": "0000-0003-0129-5640", "researcher": {"href": "https://publications-affiliated.scilifelab.se/researcher/6d2f93e8ea8f4960801202f708186f84.json"}}], "type": "dataset", "published": "2022-01-27", "journal": {"title": "Sci Data", "issn": "2052-4463", "volume": "9", "issue": "1", "pages": "26", "issn-l": "2052-4463"}, "abstract": "Confocal microscopy offers a mean to extract quantitative data on spatially confined subcellular structures. Here, we provide an imaging dataset of confocal z-stacks on endothelial cells spatially confined on lines with different widths, visualizing the nucleus, F-actin, and zonula occludens-1 (ZO-1), as well as the lines. This dataset also includes confocal images of spatially confined endothelial cells challenged with different glucose conditions. We have validated the image quality by established analytical means using the MeasureImageQuality module of the CellProfilerTM software. We envision that this dataset could be used to extract data on both a population and a single cell level, as well as a learning set for the development of new image analysis tools.", "doi": "10.1038/s41597-022-01130-x", "pmid": "35087120", "labels": [], "xrefs": [{"db": "pmc", "key": "PMC8795398"}, {"db": "pii", "key": "10.1038/s41597-022-01130-x"}], "notes": [], "created": "2026-08-20T09:04:13.297Z", "modified": "2026-08-20T09:04:13.391Z"}, {"entity": "publication", "iuid": "7b0d1e4f89b54df2b2f9bae633d245b7", "links": {"self": {"href": "https://publications-affiliated.scilifelab.se/publication/7b0d1e4f89b54df2b2f9bae633d245b7.json"}, "display": {"href": "https://publications-affiliated.scilifelab.se/publication/7b0d1e4f89b54df2b2f9bae633d245b7"}}, "title": "A practical guide to microfabrication and patterning of hydrogels for biomimetic cell culture scaffolds", "authors": [{"family": "Tenje", "given": "Maria", "initials": "M", "orcid": "0000-0002-1264-1337", "researcher": {"href": "https://publications-affiliated.scilifelab.se/researcher/bd13273274574923b354ca9c605efc8f.json"}}, {"family": "Cantoni", "given": "Federico", "initials": "F"}, {"family": "Porras Hern\u00e1ndez", "given": "Ana Mar\u00eda", "initials": "AM"}, {"family": "Searle", "given": "Sean S", "initials": "SS"}, {"family": "Johansson", "given": "Sofia", "initials": "S"}, {"family": "Barbe", "given": "Laurent", "initials": "L"}, {"family": "Antfolk", "given": "Maria", "initials": "M"}, {"family": "Pohlit", "given": "Hannah", "initials": "H", "orcid": "0000-0002-6366-7836", "researcher": {"href": "https://publications-affiliated.scilifelab.se/researcher/51f92fd9b801400d97400b78a937db6c.json"}}], "type": "journal-article", "published": "2020-12-00", "journal": {"title": "Organs-on-a-Chip", "issn": "2666-1020", "volume": "2", "pages": "100003", "issn-l": null}, "abstract": null, "doi": "10.1016/j.ooc.2020.100003", "pmid": null, "labels": [], "xrefs": [], "notes": [], "created": "2026-08-20T08:03:01.143Z", "modified": "2026-08-20T08:03:01.256Z"}]}